Showing posts with label University of Copenhagen. Show all posts
Showing posts with label University of Copenhagen. Show all posts

Tuesday, September 5

A DNA Time Capsule


For the first time, researchers have been able to extract DNA fragments from an ancient clay brick, demonstrating how these building blocks from times long past could be used to catalog flora found in the environment at the time.


When this brick was made some 2,900 years ago in what is now northern Iraq, the process would have involved mixing mud from the banks of the Tigris river, with materials such as chaff, straw, or animal dung.


Small plant particles amid the animal waste and straw can remain protected inside the brick for millennia – as has now been demonstrated by the team from the University of Oxford in the UK and the National Museum of Denmark and the University of Copenhagen in Denmark.


Having extracted a sample of the brick, the researchers used an analytical technique previously used on other forms of porous material, such as bone. This gave them the ability to sequence (or decode) the DNA in the plant matter, identifying 34 distinct taxonomic groups of plants.


"We were absolutely thrilled to discover that ancient DNA, effectively protected from contamination inside a mass of clay, can successfully be extracted from a 2,900-year-old brick," says biologist Sophie Lund Rasmussen from the University of Oxford.


The brick analyzed in this study was found in the palace of the Neo-Assyrian king Ashurnasirpal II, located in the ancient city of Kalhu. Dating it to some time between 879 and 869 BCE – the years the palace was under construction – was made easier by an inscription in the clay that specifically mentioned the palace.


Plant families with the most abundant DNA in the brick included Brassicaceae (the cabbage and mustard family) and Ericaceae (heather), while genetic material from Betulaceae (birch), Lauraceae (laurels), Selineae (the family containing carrots and parsley), and Triticeae (cultivated grasses) was also present.


"The brick serves as a biodiversity time capsule of information regarding a single site and its surroundings," says Assyriologist Troels Arbøll, from the University of Copenhagen.


"In this case, it provides researchers with a unique access to the ancient Assyrians."  READ MORE...

Wednesday, August 30

Neuroscience Breakthrough


See-through 3D model that shows the axon (red), medium spinal motor neuron (green), and astrocyte converging at the synapse (yellow). Credit: Center for Translational Neuromedicine, University of Rochester and University of Copenhagen






Scientists have created one of the most detailed 3D images of the synapse, the important juncture where neurons communicate with each other through an exchange of chemical signals. These nanometer-scale models will help scientists better understand and study neurodegenerative diseases such as Huntington’s disease and schizophrenia.

The new study appears in the journal PNAS and was authored by a team led by Steve Goldman, MD, Ph.D., co-director of the Center for Translational Neuromedicine at the University of Rochester and the University of Copenhagen. The findings represent a significant technical achievement that allows researchers to study the different cells that converge at individual synapses at a level of detail not previously achievable.

“It is one thing to understand the structure of the synapse from the literature, but it is another to see the precise geometry of interactions between individual cells with your own eyes,” said Abdellatif Benraiss, Ph.D., a research associate professor in the Center for Translational Neuromedicine and co-author of the study. “The ability to measure these extremely small environments is a young field, and holds the potential to advance our understanding of a number of neurodegenerative and neuropsychiatric diseases in which synaptic function is disturbed.”

The researchers used the new technique to compare the brains of healthy mice to mice carrying the mutant gene that causes Huntington’s disease. Prior research in Goldman’s lab has shown that dysfunctional astrocytes play a key role in the disease. Astrocytes are members of a family of support cells in the brain called glia and help maintain the proper chemical environment at the synapse.

The researchers focused on synapses that involve medium spiny motor neurons, the progressive loss of these cells is a hallmark of Huntington’s disease. The researchers first had to identify synapses hidden within the tangle of the three different cells that converge at the site: the pre-synaptic axon from a distant neuron; its target, the post-synaptic medium spiny motor neuron; and the fiber processes of a neighboring astrocyte.   READ MORE...

Thursday, September 15

Massive Triple Star System Detected

Artist’s interpretation of HD 98800, a quadruple-star system located 150 light-years away in the constellation TW Hydrae. Bin Liu and Alejandro Vigna-Gomez suggest that the more massive 
tertiary-star system TIC 470710327 could have started in a similar configuration – two binary 
systems with one of them eventually merging into one, bigger star. TIC 470710327 is located 
very close to “Cassiopeia”. Credit: NASA/JPL-Caltech/UCLA






Compact, massive triple star system detected by University of Copenhagen researchers.

Earlier this year, researchers revealed the discovery of an extraordinarily compact “one-of-a-kind” system of three stars. A partnership between two young researchers at the Niels Bohr Institute at the University of Copenhagen is currently focusing on how this unusual combination of a binary set of stars and a revolving larger star can form.

Tertiary star formation on a massive scale

The star system is made up of a binary set of stars, two stars that orbit each other, and one more massive star that orbits the binary.

“As far as we know, it is the first of its kind ever detected”, Alejandro Vigna-Gomez says. “We know of many tertiary star systems (three star systems), but they are typically significantly less massive. 

The massive stars in this triple are very close together – it is a compact system. The orbital period of the binary (~1 d) is the same as that of the rotation of Earth (1 day). The combined mass of the two of them is twelve times the mass of our Sun – so rather big stars. 

The tertiary star is approximately 16 times the mass of our Sun, so even bigger! The inner orbit is circular in shape with close to six revolutions of the tertiary star around the binary per year. 

Pretty fast, when you consider the size of them – unsurprisingly, the system is very luminous, so at first they were detected as a stellar binary”.  READ MORE...

Saturday, July 16

Prehistoric Egg Identified

The only almost completely intact Genyornis eggshell ever discovered. It was located by 
N. Spooner and collected by Gifford H. Miller, South Australia. The presence of four 
puncture wounds on the egg indicates that it was predated by a scavenging marsupial. 
Credit: Gifford H. Miller




A years-long scientific controversy in Australia about what animal is the true mother of gigantic primordial eggs has been settled. In a recent study, scientists from the University of Copenhagen and their global counterparts showed that the eggs could only be the last of a rare line of megafauna known as the “Demon Ducks of Doom.”

Consider living next to a 200 kg, two meters tall bird with a huge beak. This was the situation for the first people who settled in Australia some 65,000 years ago.

Genyornis newtoni, the last members of the “Demon Ducks of Doom,” coexisted there with our ancestors as a species of a now-extinct family of duck-like birds.

According to a recent study by experts from the University of Copenhagen and an international team of colleagues, the flightless bird lay eggs the size of cantaloupe melons, presumably to the delight of ancient humans who most likely gathered and consumed them as an essential protein source. The research was just released in the journal Proceedings of the National Academy of Sciences.

Since experts initially found the 50,000-year-old eggshell pieces 40 years ago, the huge eggs have been the subject of debate. It wasn’t known until recently if the eggs genuinely belonged to the family of “demon-ducks,” also known as dromornithids.

Since 1981, the identity of the bird that lay the eggs has been a source of controversy for scientists all across the globe. While some proposed Genyornis newtoni, others thought the shells were from Progura birds, an extinct member of the megapode group of species. Progura were “chicken-like birds” that only weighed between five and seven kilos and had huge feet.  READ MORE...